survival_custom: Custom survival plots This function is modified after the...

In benostendorf/thresholdr: Calculate Latencies between Volume Thresholds

Description

Custom survival plots This function is modified after the function in '~/src/functions.R', and is partly inspired by the Imvigor210Corebiologies R package (Mariathasan et al., Nature, 2018).

Usage

survival_custom(survFit, filename = NULL, title = NULL,
  custom_palette = NULL, custom_legends = NULL, width = 2,
  height = 2.2, xlab = "Overall survival (years)",
  ylab = "Survival probability")

Arguments

survFit	survFit object
filename	character or NULL; define filename when exporting pdf
title	character; plot title
custom_palette	character; custom color palette
custom_legends	character; custom legend labels (take note of warning below)
width	numeric; width of pdf export
height	numeric; height of pdf export
xlab	character; x-axis label
ylab	character; y-axis label

Author(s)

Benjamin Ostendorf

benostendorf/thresholdr documentation built on Nov. 4, 2019, 7:14 a.m.