Description Usage Arguments Value
ADVANCED USE ONLY A function to perform MALA for the spatial only case
1 2 3 | MALAlgcpSpatial(mcmcloop, inits, adaptivescheme, M, N, Mext, Next, sigma, phi,
mu, nis, cellarea, spatialvals, scaleconst, rootQeigs, invrootQeigs,
cellInside, MCMCdiag, gradtrunc, gridfun, gridav, mcens, ncens)
|
mcmcloop |
an mcmcLoop object |
inits |
initial values from mcmc.control |
adaptivescheme |
adaptive scheme from mcmc.control |
M |
number of cells in x direction on output grid |
N |
number of cells in y direction on output grid |
Mext |
number of cells in x direction on extended output grid |
Next |
number of cells in y direction on extended output grid |
sigma |
spatial covariance parameter sigma |
phi |
spatial covariance parameter phi |
mu |
spatial covariance parameter mu |
nis |
cell counts matrix |
cellarea |
area of cells |
spatialvals |
spatial at risk, function lambda, interpolated onto the requisite grid |
scaleconst |
expected number of observations |
rootQeigs |
square root of eigenvalues of precision matrix |
invrootQeigs |
inverse square root of eigenvalues of precision matrix |
cellInside |
logical matrix dictating whether cells are inside the observation window |
MCMCdiag |
defunct |
gradtrunc |
gradient truncation parameter |
gridfun |
grid functions |
gridav |
grid average functions |
mcens |
x-coordinates of cell centroids |
ncens |
y-coordinates of cell centroids |
object passed back to lgcpPredictSpatial
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