Files in bentaylor1/lgcp
Log-Gaussian Cox Process

DESCRIPTION
DESCRIPTION~
NAMESPACE
NEWS
NEWS~
R/AggregateSpatialOnlyPlusParameters.R R/MultitypeSpatialOnlyPlusParameters.R R/SpatialOnlyPlusParameters.R R/SpatioTemporalPlusParameters.R R/adaptiveSchemes.R R/arealMethods.R R/computeGradtrunc.R R/fftgrid.R R/geometryHandling.R R/getCounts.R R/gridAverageMethods.R R/gridFunctionMethods.R R/lgcp-INLA.R R/lgcp.R R/lgcpForecast.R R/lgcpInternals.R R/lgcpMethods.R R/lgcpPredictSpatial.R R/lgcpPredictSpatioTemporal.R R/lgcpSimSpatioTemporal.R R/lgcpStructures.R R/lgcppars.R R/mcmcIterator.R R/mcmcProgress.R R/mcmcpars.R R/minimumContrast.R R/mstpppClassDef.R R/parameterEstimation.R R/selectObsWindow.R R/setoutput.R R/spatialAtRiskClassDef.R R/spatialOnly.R R/stpppClassDef.R R/temporalAtRiskClassDef.R R/txtProgressBar2.R R/zzz.R README.md
data/wpopdata.rda
data/wtowncoords.rda
data/wtowns.rda
inst/CITATION
man/BetaParameters.Rd man/C.diff.single.im.Rd man/CovFunction.Rd man/CovFunction.function.Rd man/CovParameters.Rd man/Cvb.Rd man/EvaluatePrior.Rd man/Extract.mstppp.Rd man/Extract.stppp.Rd man/GAfinalise.MonteCarloAverage.Rd man/GAfinalise.Rd man/GAfinalise.nullAverage.Rd man/GAinitialise.MonteCarloAverage.Rd man/GAinitialise.Rd man/GAinitialise.nullAverage.Rd man/GAreturnvalue.MonteCarloAverage.Rd man/GAreturnvalue.Rd man/GAreturnvalue.nullAverage.Rd man/GAupdate.MonteCarloAverage.Rd man/GAupdate.Rd man/GAupdate.nullAverage.Rd man/GFfinalise.Rd man/GFfinalise.dump2dir.Rd man/GFfinalise.nullFunction.Rd man/GFinitialise.Rd man/GFinitialise.dump2dir.Rd man/GFinitialise.nullFunction.Rd man/GFreturnvalue.Rd man/GFreturnvalue.dump2dir.Rd man/GFreturnvalue.nullFunction.Rd man/GFupdate.Rd man/GFupdate.dump2dir.Rd man/GFupdate.nullFunction.Rd man/GPdrv.Rd man/GPdrv2.Rd man/GPdrv2_Multitype.Rd man/GPlist2array.Rd man/GPrealisation.Rd man/GammafromY.Rd man/GaussianPrior.Rd man/K.diff.single.Rd man/K.u.Rd man/K.val.Rd man/KinhomAverage.Rd man/LogGaussianPrior.Rd man/MALAlgcp.Rd man/MALAlgcpAggregateSpatial.PlusPars.Rd man/MALAlgcpMultitypeSpatial.PlusPars.Rd man/MALAlgcpSpatial.PlusPars.Rd man/MALAlgcpSpatial.Rd man/MALAlgcpSpatioTemporal.PlusPars.Rd man/MonteCarloAverage.Rd man/PriorSpec.Rd man/PriorSpec.list.Rd man/RandomFieldsCovFct.Rd man/SpatialPolygonsDataFrame.stapp.Rd man/SpikedExponentialCovFct.Rd man/YfromGamma.Rd man/add.list.Rd man/addTemporalCovariates.Rd man/affine.SpatialPolygonsDataFrame.Rd man/affine.fromFunction.Rd man/affine.fromSPDF.Rd man/affine.fromXYZ.Rd man/affine.stppp.Rd man/aggCovInfo.ArealWeightedMean.Rd man/aggCovInfo.ArealWeightedSum.Rd man/aggCovInfo.Majority.Rd man/aggCovInfo.Rd man/aggregateCovariateInfo.Rd man/aggregateformulaList.Rd man/andrieuthomsh.Rd man/as.SpatialGridDataFrame.Rd man/as.SpatialGridDataFrame.fromXYZ.Rd man/as.SpatialPixelsDataFrame.Rd man/as.SpatialPixelsDataFrame.lgcpgrid.Rd man/as.array.lgcpgrid.Rd man/as.fromXYZ.Rd man/as.fromXYZ.fromFunction.Rd man/as.im.fromFunction.Rd man/as.im.fromSPDF.Rd man/as.im.fromXYZ.Rd man/as.list.lgcpgrid.Rd man/as.owin.stapp.Rd man/as.owinlist.Rd man/as.owinlist.SpatialPolygonsDataFrame.Rd man/as.owinlist.stapp.Rd man/as.ppp.mstppp.Rd man/as.ppp.stppp.Rd man/as.stppp.Rd man/as.stppp.stapp.Rd man/assigninterp.Rd man/at.Rd man/autocorr.Rd man/autocorrMultitype.Rd man/betavals.Rd man/blockcircbase.Rd man/blockcircbaseFunction.Rd man/bt.scalar.Rd man/checkObsWin.Rd man/chooseCellwidth.Rd man/circulant.Rd man/circulant.matrix.Rd man/circulant.numeric.Rd man/clearinterp.Rd man/computeGradtruncSpatial.Rd man/computeGradtruncSpatioTemporal.Rd man/condProbs.Rd man/constantInTime.Rd man/constantInTime.numeric.Rd man/constantInTime.stppp.Rd man/constanth.Rd man/cov.interp.fft.Rd man/covEffects.Rd man/d.func.Rd man/density.stppp.Rd man/discreteWindow.Rd man/discreteWindow.lgcpPredict.Rd man/dump2dir.Rd man/eigenfrombase.Rd man/etavals.Rd man/exceedProbs.Rd man/exceedProbsAggregated.Rd man/expectation.Rd man/expectation.lgcpPredict.Rd man/expectation.lgcpPredictSpatialOnlyPlusParameters.Rd man/exponentialCovFct.Rd man/extendspatialAtRisk.Rd man/extract.Rd man/extract.lgcpPredict.Rd man/fftgrid.Rd man/fftinterpolate.Rd man/fftinterpolate.fromFunction.Rd man/fftinterpolate.fromSPDF.Rd man/fftinterpolate.fromXYZ.Rd man/fftmultiply.Rd man/formulaList.Rd man/g.diff.single.Rd man/gOverlay.Rd man/genFFTgrid.Rd man/getCellCounts.Rd man/getCounts.Rd man/getCovParameters.GPrealisation.Rd man/getCovParameters.Rd man/getCovParameters.list.Rd man/getLHSformulaList.Rd man/getRotation.Rd man/getRotation.default.Rd man/getRotation.stppp.Rd man/getZmat.Rd man/getZmats.Rd man/getinterp.Rd man/getlgcpPredictSpatialINLA.Rd man/getpolyol.Rd man/getup.Rd man/ginhomAverage.Rd man/grid2spdf.Rd man/grid2spix.Rd man/grid2spoly.Rd man/grid2spts.Rd man/gridInWindow.Rd man/gridav.Rd man/gridav.lgcpPredict.Rd man/gridfun.Rd man/gridfun.lgcpPredict.Rd man/gu.Rd man/guessinterp.Rd man/hasNext.Rd man/hasNext.iter.Rd man/hvals.Rd man/hvals.lgcpPredict.Rd man/identify.lgcpPredict.Rd man/identifygrid.Rd man/image.lgcpgrid.Rd man/initialiseAMCMC.Rd man/initialiseAMCMC.andrieuthomsh.Rd man/initialiseAMCMC.constanth.Rd man/integerise.Rd man/integerise.mstppp.Rd man/integerise.stppp.Rd man/intens.Rd man/intens.lgcpPredict.Rd man/intens.lgcpSimMultitypeSpatialPlusParameters.Rd man/intens.lgcpSimSpatialPlusParameters.Rd man/interptypes.Rd man/inversebase.Rd man/is.SPD.Rd man/is.burnin.Rd man/is.pow2.Rd man/is.retain.Rd man/iteration.Rd man/lambdaEst.Rd man/lambdaEst.ppp.Rd man/lambdaEst.stppp.Rd man/lgcp-package.Rd man/lgcpForecast.Rd man/lgcpInits.Rd man/lgcpPredict.Rd man/lgcpPredictAggregateSpatialPlusPars.Rd man/lgcpPredictAggregated.Rd man/lgcpPredictMultitypeSpatialPlusPars.Rd man/lgcpPredictSpatial.Rd man/lgcpPredictSpatialINLA.Rd man/lgcpPredictSpatialPlusPars.Rd man/lgcpPredictSpatioTemporalPlusPars.Rd man/lgcpPrior.Rd man/lgcpSim.Rd man/lgcpSimMultitypeSpatialCovariates.Rd man/lgcpSimSpatial.Rd man/lgcpSimSpatialCovariates.Rd man/lgcpbayes.Rd man/lgcpgrid.Rd man/lgcpgrid.array.Rd man/lgcpgrid.list.Rd man/lgcpgrid.matrix.Rd man/lgcppars.Rd man/lgcpvignette.Rd man/loc2poly.Rd man/loop.mcmc.Rd man/ltar.Rd man/matchcovariance.Rd man/mcmcLoop.Rd man/mcmcProgressNone.Rd man/mcmcProgressPrint.Rd man/mcmcProgressTextBar.Rd man/mcmcProgressTk.Rd man/mcmcpars.Rd man/mcmctrace.Rd man/mcmctrace.lgcpPredict.Rd man/meanfield.Rd man/meanfield.lgcpPredict.Rd man/meanfield.lgcpPredictINLA.Rd man/minimum.contrast.Rd man/minimum.contrast.spatiotemporal.Rd man/mstppp.Rd man/mstppp.list.Rd man/mstppp.ppp.Rd man/mstppp.stppp.Rd man/muEst.Rd man/multiply.list.Rd man/my.KinhomAverage.Rd man/my.ginhomAverage.Rd man/neattable.Rd man/neigh2D.Rd man/nextStep.Rd man/nullAverage.Rd man/nullFunction.Rd man/numCases.Rd man/osppp2latlon.Rd man/osppp2merc.Rd man/paramprec.Rd man/paramprecbase.Rd man/parautocorr.Rd man/parsummary.Rd man/plot.fromSPDF.Rd man/plot.fromXYZ.Rd man/plot.lgcpAutocorr.Rd man/plot.lgcpPredict.Rd man/plot.lgcpQuantiles.Rd man/plot.lgcpZmat.Rd man/plot.lgcpgrid.Rd man/plot.mcmcdiag.Rd man/plot.mstppp.Rd man/plot.stppp.Rd man/plot.temporalAtRisk.Rd man/plotExceed.Rd man/plotExceed.array.Rd man/plotExceed.lgcpPredict.Rd man/plotit.Rd man/postcov.Rd man/postcov.lgcpPredictAggregateSpatialPlusParameters.Rd man/postcov.lgcpPredictMultitypeSpatialPlusParameters.Rd man/postcov.lgcpPredictSpatialOnlyPlusParameters.Rd man/postcov.lgcpPredictSpatioTemporalPlusParameters.Rd man/print.dump2dir.Rd man/print.fromFunction.Rd man/print.fromSPDF.Rd man/print.fromXYZ.Rd man/print.gridaverage.Rd man/print.lgcpPredict.Rd man/print.lgcpgrid.Rd man/print.mcmc.Rd man/print.mstppp.Rd man/print.stapp.Rd man/print.stppp.Rd man/print.temporalAtRisk.Rd man/priorpost.Rd man/quantile.lgcpPredict.Rd man/quantile.lgcpgrid.Rd man/raster.lgcpgrid.Rd man/rescale.mstppp.Rd man/rescale.stppp.Rd man/resetLoop.Rd man/rgauss.Rd man/roteffgain.Rd man/rotmat.Rd man/rr.Rd man/rr.lgcpPredict.Rd man/samplePosterior.Rd man/segProbs.Rd man/seintens.Rd man/seintens.lgcpPredict.Rd man/selectObsWindow.Rd man/selectObsWindow.default.Rd man/selectObsWindow.stppp.Rd man/serr.Rd man/serr.lgcpPredict.Rd man/setTxtProgressBar2.Rd man/setoutput.Rd man/showGrid.Rd man/showGrid.default.Rd man/showGrid.lgcpPredict.Rd man/showGrid.stppp.Rd man/smultiply.list.Rd man/sparsebase.Rd man/spatialAtRisk.Rd man/spatialAtRisk.SpatialGridDataFrame.Rd man/spatialAtRisk.SpatialPolygonsDataFrame.Rd man/spatialAtRisk.bivden.Rd man/spatialAtRisk.default.Rd man/spatialAtRisk.fromXYZ.Rd man/spatialAtRisk.function.Rd man/spatialAtRisk.im.Rd man/spatialAtRisk.lgcpgrid.Rd man/spatialIntensities.Rd man/spatialIntensities.fromSPDF.Rd man/spatialIntensities.fromXYZ.Rd man/spatialparsEst.Rd man/stGPrealisation.Rd man/stapp.Rd man/stapp.SpatialPolygonsDataFrame.Rd man/stapp.list.Rd man/stppp.Rd man/stppp.list.Rd man/stppp.ppp.Rd man/summary.lgcpgrid.Rd man/summary.mcmc.Rd man/target.and.grad.AggregateSpatialPlusPars.Rd man/target.and.grad.MultitypespatialPlusPars.Rd man/target.and.grad.SpatioTemporalPlusPars.Rd man/target.and.grad.spatial.Rd man/target.and.grad.spatialPlusPars.Rd man/target.and.grad.spatiotemporal.Rd man/tempRaster.Rd man/temporalAtRisk.Rd man/temporalAtRisk.function.Rd man/temporalAtRisk.numeric.Rd man/textsummary.Rd man/thetaEst.Rd man/toral.cov.mat.Rd man/touchingowin.Rd man/traceplots.Rd man/transblack.Rd man/transblue.Rd man/transgreen.Rd man/transred.Rd man/txtProgressBar2.Rd man/updateAMCMC.Rd man/updateAMCMC.andrieuthomsh.Rd man/updateAMCMC.constanth.Rd man/varfield.Rd man/varfield.lgcpPredict.Rd man/varfield.lgcpPredictINLA.Rd man/window.lgcpPredict.Rd man/wpopdata.Rd man/wtowncoords.Rd man/wtowns.Rd man/xvals.Rd man/xvals.SpatialGridDataFrame.Rd man/xvals.default.Rd man/xvals.fromXYZ.Rd man/xvals.lgcpPredict.Rd man/yvals.Rd man/yvals.SpatialGridDataFrame.Rd man/yvals.default.Rd man/yvals.fromXYZ.Rd man/yvals.lgcpPredict.Rd man/zvals.Rd man/zvals.SpatialGridDataFrame.Rd man/zvals.default.Rd man/zvals.fromXYZ.Rd tests/adaptiveSchemesTest.R tests/fromSPDFTest.R tests/gridAverageTest.R tests/gridSummaryTest.R tests/iteratorTest.R tests/lgcpMethodsTest.R tests/mstpppClassTest.R tests/stpppClassTest.R
vignettes/lgcp.Rnw
vignettes/lgcp.Rnw~
bentaylor1/lgcp documentation built on May 11, 2017, 7:12 a.m.