Man pages for bgctw/REddyProc
Data Processing and Plotting Utilities of (Half-)Hourly Eddy-Covariance Measurements

BerkeleyJulianDateToPOSIXctBerkeleyJulianDateToPOSIXct
DEGebExampleEddy covariance data from Gebesee crop site, Germany
Example_DETha98Eddy covariance data from Tharandt, Germany
fAddNCFVarfAddNCFVar
fCalcAVPfromVMFandPressfCalcAVPfromVMFandPress
fCalcETfromLEfCalcETfromLE
fCalcExtRadiationfCalcExtRadiation
fCalcPotRadiationfCalcPotRadiation
fCalcRHfromAVPandTairfCalcRHfromAVPandTair
fCalcSunPositionfCalcSunPosition
fCalcSVPfromTairfCalcSVPfromTair
fCalcVPDfromRHandTairfCalcVPDfromRHandTair
fCheckHHTimeSeriesfCheckHHTimeSeries
fConvertCtoKfConvertCtoK
fConvertGlobalToVisiblefConvertGlobalToVisible
fConvertKtoCfConvertKtoC
fConvertTimeToPosixConvert different time formats to POSIX
fConvertVisibleWm2toPhotonsfConvertVisibleWm2toPhotons
fLloydTaylorTemperature dependence of soil respiration
fLoadEuroFlux16fLoadEuroFlux16
fLoadFluxNCInfoGet site information from BGI NetCDF files
fLoadFluxNCIntoDataframeLoad NetCDF file
fLoadTXTIntoDataframeLoad text file with one header and one unit row into data...
fReadTimeBerkeleyfReadTimeBerkeley
fReadTimeSeveralColsfReadTimeSeveralCols
fWriteDataframeToFilefWriteDataframeToFile
getAmerifluxToBGC05VariableNameMappinggetAmerifluxToBGC05VariableNameMapping
getBGC05ToAmerifluxVariableNameMappinggetBGC05ToAmerifluxVariableNameMapping
getExamplePathgetExamplePath
getFilledExampleDETha98DatagetFilledExampleDETha98Data
globalDummyVarsglobalDummyVars
LightResponseCurveFitterLightResponseCurveFitter
LightResponseCurveFitter-classClass '"LightResponseCurveFitter"'
LightResponseCurveFitter_computeCostLightResponseCurveFitter computeCost
LightResponseCurveFitter_computeLRCGradientLightResponseCurveFitter computeLRCGradient
LightResponseCurveFitter_fitLRCLightResponseCurveFitter fitLRC
LightResponseCurveFitter_getOptimizedParameterPositionsLightResponseCurveFitter getOptimizedParameterPositions
LightResponseCurveFitter_getParameterInitialsLightResponseCurveFitter getParameterInitials
LightResponseCurveFitter_getParameterNamesLightResponseCurveFitter getParameterNames
LightResponseCurveFitter_getPriorLocationLightResponseCurveFitter getPriorLocation
LightResponseCurveFitter_getPriorScaleLightResponseCurveFitter getPriorScale
LightResponseCurveFitter_isParameterInBoundsLightResponseCurveFitter isParameterInBounds
LightResponseCurveFitter_optimLRCLightResponseCurveFitter optimLRC
LightResponseCurveFitter_optimLRCBoundsLightResponseCurveFitter optimLRCBounds
LightResponseCurveFitter_optimLRCOnAdjustedPriorLightResponseCurveFitter optimLRCOnAdjustedPrior
LightResponseCurveFitter_predictGPPLightResponseCurveFitter predictGPP
LightResponseCurveFitter_predictLRCLightResponseCurveFitter predictLRC
LogisticSigmoidLRCFitterLogisticSigmoidLRCFitter
LogisticSigmoidLRCFitter-classClass '"LogisticSigmoidLRCFitter"'
LogisticSigmoidLRCFitter_predictGPPLogisticSigmoidLRCFitter predictGPP
NonrectangularLRCFitterNonrectangularLRCFitter
NonrectangularLRCFitter-classClass '"NonrectangularLRCFitter"'
NonrectangularLRCFitter_getParameterNamesNonrectangularLRCFitter getParameterNames
NonrectangularLRCFitter_predictGPPNonrectangularLRCFitter predictGPP
partGLControlpartGLControl
partGLControlLasslopCompatiblepartGLControlLasslopCompatible
partGLExtractStandardDatapartGLExtractStandardData
partitionNEEGLpartitionNEEGL
POSIXctToBerkeleyJulianDatePOSIXctToBerkeleyJulianDate
RectangularLRCFitterRectangularLRCFitter
RectangularLRCFitter-classClass '"RectangularLRCFitter"'
RectangularLRCFitterCVersionRectangularLRCFitterCVersion
RectangularLRCFitterCVersion-classClass '"RectangularLRCFitterCVersion"'
RectangularLRCFitter_predictGPPRectangularLRCFitter predictGPP
REddyProc-packageData processing and plotting utilities of (half-)hourly...
renameVariablesInDataframerenameVariablesInDataframe
RHLightResponseCostCRHLightResponseCostC
sEddyProcsEddyProc
sEddyProc-classClass '"sEddyProc"'
sEddyProc.examplesEddyProc - Example code
sEddyProc_initializesEddyProc_initialize - Initialization of sEddyProc
sEddyProc_sCalcPotRadiationsEddyProc sCalcPotRadiation
sEddyProc_sEstUstarThresholdsEddyProc$sEstUstarThreshold - Estimating ustar threshold
sEddyProc_sEstUstarThresholdDistributionsEddyProc sEstUstarThresholdDistribution
sEddyProc_sExportDatasEddyProc$sExportData - Export internal sDATA data frame
sEddyProc_sExportResultssEddyProc$sExportData - Export internal sTEMP data frame with...
sEddyProc_sFillInitsEddyProc$sFillInit - Initialize gap filling
sEddyProc_sFillLUTsEddyProc$sFillLUT - Gap filling with Look-Up Table (LUT)
sEddyProc_sFillMDCsEddyProc$sFillMDC - Gap filling with Mean Diurnal Course...
sEddyProc_sGetDatasEddyProc$sGetData - Get internal sDATA data frame
sEddyProc_sGLFluxPartitionsGLFluxPartition: Flux partitioning after Lasslop et al....
sEddyProc_sMDSGapFillsEddyProc$sMDSGapFill - MDS gap filling algorithm
sEddyProc_sMDSGapFillAfterUstarsEddyProc$sMDSGapFillAfterUstar - MDS gap filling algorithm...
sEddyProc_sMDSGapFillAfterUStarDistrGapFilling for several filters of estimated friction velocity...
sEddyProc_sMRFluxPartitionsEddyProc$sMRFluxPartition - Flux partitioning after...
sEddyProc_sPlotDailySumssEddyProc$sPlotDailySums - Image with daily sums of each year
sEddyProc_sPlotDailySumsYsEddyProc$sPlotDailySumsY - Plot daily sum of specified year
sEddyProc_sPlotDiurnalCyclesEddyProc$sPlotDiurnalCycle - Image with diurnal cycles of...
sEddyProc_sPlotFingerprintsEddyProc$sPlotFingerprint - Image with fingerprints of each...
sEddyProc_sPlotFingerprintYsEddyProc$sPlotFingerprintY - Plot fingerprint of specified...
sEddyProc_sPlotHHFluxessEddyProc$sPlotHHFluxes - Image with half-hourly fluxes for...
sEddyProc_sPlotHHFluxesYsEddyProc$sPlotHHFluxesY - Plot half-hourly fluxes of...
sEddyProc_sPlotNEEVersusUStarForSeasonsEddyProc$sPlotNEEVersusUStarForSeason - Image with NEE...
sEddyProc_sSetLocationInfosEddyProc sSetLocationInfo
usControlUstarEstusControlUstarEst
usControlUstarSubsettingusControlUstarSubsetting
usCreateSeasonFactorMonthusCreateSeasonFactorMonth
usCreateSeasonFactorMonthWithinYearusCreateSeasonFactorMonthWithinYear
usCreateSeasonFactorYdayusCreateSeasonFactorYday
usCreateSeasonFactorYdayYearusCreateSeasonFactorYdayYear
usEstUstarThresholdusEstUstarThreshold - Estimating ustar threshold
usEstUstarThresholdSingleFw1BinnedusEstUstarThresholdSingleFw1Binned
usEstUstarThresholdSingleFw2BinnedusEstUstarThresholdSingleFw2Binned
usGetAnnualSeasonUStarMapusGetAnnualSeasonUStarMap
usGetSeasonalSeasonUStarMapusGetSeasonalSeasonUStarMap
usGetYearOfSeasonusGetYearOfSeason
bgctw/REddyProc documentation built on Nov. 21, 2017, 1:51 a.m.