calculate_longterm_leaf: leaf-to-ambient CO2 ratio (chi_o) and Water use efficiency...

Description Usage Arguments Details Value References Examples

View source: R/priego.R

Description

Calculate long-term effective "internal" leaf-to-ambient CO2 (chi_o) and Water use efficiency (WUE_o)

Usage

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calculate_longterm_leaf(
  data,
  altitude,
  C = config$C,
  config = priego_config(),
  constants = etpart_constants()
)

Arguments

data

Data.frame with columns

  • GPP: photosynthesis (umol CO2 m-2 s-1)

  • VPD: vapor pressure deficit (kPa).

  • Tair: air temperature (deg C).

altitude

numeric value defining elevation (m).

C

Empirical coeficient for C3 species. (see Wang et al., 2017; Plant Nature)

config

configuration (priego_config) with entry C for default of argument C

constants

physical constants, see etpart_constants

Details

the following metrics are calculated:

chi_o:

logistic_chi_o = 0.0545*(Tair_g-25)-0.58*log(VPD_g)-0.0815*Z+C

chi_o <- exp(logistic_chi_o)/(1+exp(logistic_chi_o))

WUE_o:

WUE_o <- (390*(1-chi_o)*96)/(1.6*VPD_g)*0.001

Tair_g and VPD_g are calculated based on the mean value of the growing period. The growing period is estimated as those periods over the 85 quantile of GPP.

Value

list with numeric entries:

chi_o

long-term effective "internal" leaf-to-ambient CO2 (unitless)

WUE_o

long-term effective Water use efficiency (umolCO2 mmol-1)

References

Wang, H., I. C. Prentice, et al., (2017), Towards a universal model for carbon dioxide uptake by plants, Nature Plants, 3(9), 734-741.

Reichstein, M., et al. (2005), On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm, Global Change Biology, 11(9), 1424-1439.

Examples

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bgctw/etpart documentation built on Dec. 19, 2021, 8:49 a.m.