kinrespModel1: kinrespModel1

In bgctw/twKinresp: Fitting kinetic models to microbial respiration data

Description

Respiration for given microbial parameters at given time.

Usage

kinrespModel1(x0, r0, mumax, time, lambda = 0.9, 
    YCO2 = 1.5)

Arguments

x0	initial microbial biomass (numeric scalar)
r0	initial microbial activity (numeric scalar)
mumax	maximum growth rate (numeric scalar)
time	time (numeric vector)
lambda	Ratio of growth associated (coupled) specific respiration to total specific respiration. Usually 0.9.
YCO2	Ratio of assimilated carbon per respired carbon. Usually 1.5.

Value

respiration at given time points (numeric vector)

Author(s)

Thomas Wutzler <[e-mail]>

Examples

#data(respWutzler10)
ds <- subset(respWutzler10, replicate==1 & experiment ==  1 & suite == 'Face' & time < 25)
resp0 <- kinrespModel1( x0=118, r0=0.029, mumax=0.21, time=ds$time)
plot( resp~time, data=ds)
lines(resp0~ds$time)

bgctw/twKinresp documentation built on May 10, 2019, 2:42 p.m.