Man pages for bhklab/RadioGx
Analysis of Large-Scale Radio-Genomic Data
| availableRSets | Return a table of RadioSets available for download |
| checkRSetStructure | A function to verify the structure of a RadioSet |
| clevelandSmall | Cleaveland_mut RadioSet subsetted |
| computeAUC | computeAUC: computes AUC |
| computeD10 | Compute D10 |
| computeSF2 | Compute SF2 |
| dim-RadioSet-method | Get the dimensions of a RadioSet |
| doseResponseCurve | Plot drug response curve of a given drug and a given cell for... |
| downloadRSet | Download a RadioSet object |
| linearQuadraticModel | Fit linear-quadratic curves to dose-response data |
| plotCurve | Plot radiation dose-response curve |
| RadioSet | RadioSet constructor |
| RadioSet-accessors | Accessing and modifying information in a 'RadioSet' |
| RadioSet-class | A Class to Contain RadioGenomic datasets together with their... |
| RadioSig | Radiation Signature Class Constructor |
| radSensitivitySig | Creates a signature representing the association between gene... |
| show-RadioSet-method | Show a RadioSet |
| show-RadioSig-method | Show RadioGx Signatures |
| showSigAnnot-RadioSig-method | Show the Annotations of a signature object |
| sub-RadioSet-ANY-ANY-ANY-method | '[' |
| subsetTo-RadioSet-method | A function to subset a RadioSet to data containing only... |
| summarizeMolecularProfiles-RadioSet-method | Takes molecular data from a RadioSet, and summarises them... |
| summarizeSensitivityProfiles-RadioSet-method | Takes the sensitivity data from a RadioSet, and summarises... |
| updateObject-RadioSet-method | Update the RadioSet class after changes in it struture or API |
