Man pages for bhklab/RadioGx
Analysis of Large-Scale Radio-Genomic Data

availableRSetsReturn a table of RadioSets available for download
checkRSetStructureA function to verify the structure of a RadioSet
clevelandSmallCleaveland_mut RadioSet subsetted
computeAUCcomputeAUC: computes AUC
computeD10Compute D10
computeSF2Compute SF2
dim-RadioSet-methodGet the dimensions of a RadioSet
doseResponseCurvePlot drug response curve of a given drug and a given cell for...
downloadRSetDownload a RadioSet object
linearQuadraticModelFit linear-quadratic curves to dose-response data
plotCurvePlot radiation dose-response curve
RadioSetRadioSet constructor
RadioSet-accessorsAccessing and modifying information in a 'RadioSet'
RadioSet-classA Class to Contain RadioGenomic datasets together with their...
RadioSigRadiation Signature Class Constructor
radSensitivitySigCreates a signature representing the association between gene...
show-RadioSet-methodShow a RadioSet
show-RadioSig-methodShow RadioGx Signatures
showSigAnnot-RadioSig-methodShow the Annotations of a signature object
sub-RadioSet-ANY-ANY-ANY-method'['
subsetTo-RadioSet-methodA function to subset a RadioSet to data containing only...
summarizeMolecularProfiles-RadioSet-methodTakes molecular data from a RadioSet, and summarises them...
summarizeSensitivityProfiles-RadioSet-methodTakes the sensitivity data from a RadioSet, and summarises...
updateObject-RadioSet-methodUpdate the RadioSet class after changes in it struture or API
bhklab/RadioGx documentation built on Oct. 6, 2023, 8:27 a.m.