Files in bhklab/rPharmacoDI
PharmacoDB Data Ingestion - functions for converting pSets to PharmacoDB database tables
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/.deprecated.R
R/coerce-methods.R
R/convertGeneSignatureToDT.R
R/convertMetaAnalysisToDT.R
R/geneAnnotationToCSV.R
R/generics.R
R/getPSetGeneSigs.R
R/processGeneSignatureFiles.R
R/removeNonASCII.R
R/stripEnsemblVersions.R
R/utils.R
R/writeToCsv-methods.R
R/writeToParquet-methods.R
README.md
man/convertGeneSignatureToDT.Rd
man/convertMetaAnalysisToDT.Rd
man/dot-convertSEToDataTableList.Rd
man/dot-removeEnsemblVersion.Rd
man/dot-sensSlotToDataTables.Rd
man/dot-writeAnnotationToTxt.Rd
man/dot-writeMolecularProfilesToCsv.Rd
man/dot-writeMolecularProfilesToParquet.Rd
man/dot-writeSensitivityToCsv.Rd
man/dot-writeSensitivityToParquet.Rd
man/geneAnnotationToCSV.Rd
man/getPSetGeneSigs.Rd
man/mergePSetGeneSigsToDT.Rd
man/processGeneSignatureFiles.Rd
man/processPanCancerGeneSignatureFiles.Rd
man/readGeneSig.Rd
man/readGeneSigsForPSet.Rd
man/readSigToDT.Rd
man/removeNonASCII.Rd
man/stripEnsemblVersion-PharmacoSet-method.Rd
man/writeToCsv-PharmacoSet-method.Rd
man/writeToCsv.Rd
man/writeToParquet-PharmacoSet-method.Rd
man/writeToParquet.Rd
man/zeroPad.Rd
scripts/downloadAndExtractPharmacoSets.R
scripts/extractGeneSigDataTables.R
scripts/move_signatures.sh
