geneAnnotationToCSV: Dump gene annotation files to .csv for use in PharmacoDI

In bhklab/rPharmacoDI: PharmacoDB Data Ingestion - functions for converting pSets to PharmacoDB database tables

Dump gene annotation files to .csv for use in PharmacoDI

Description

Dump gene annotation files to .csv for use in PharmacoDI

Usage

geneAnnotationToCSV(
  filePath = file.path("../..", "data", "metadata"),
  pattern = "Gencode.v33.annotation.*"
)

Arguments

filePath	['character'] vector indiciating path to the annotation directory
pattern	['character'] files to match using 'pattern' argument in 'list.files' function

Value

NULL Writes files to 'filePath'

bhklab/rPharmacoDI documentation built on Oct. 31, 2022, 11:06 a.m.