get_sih: Get hospital admissions data from SIH

In bigdata-icict/pcdasindi: Calculates health indicators to Brazil

Description

This function retrieves hospital admission data from PCDaS ElasticSearch cluster for a specified year.

Usage

get_sih(
  conn,
  agr,
  ano = NULL,
  sexo = NULL,
  diag_princ = NULL,
  diag_princ_capitulo = NULL,
  diag_princ_grupo = NULL,
  diag_princ_categoria = NULL,
  diag_princ_subcategoria = NULL,
  idade_anos_min = NULL,
  idade_anos_max = NULL,
  proced_real = NULL,
  lucene_query = NULL
)

Arguments

conn	Connection object created with pcdas_connect.
ano	numeric. Year of death.
sexo	string. Sex of the patient Masculino for males or Feminino for females.
diag_princ	string. CID-10 code for the main diagnosis.
diag_princ_capitulo	string. Chapter of the main diagnosis.
diag_princ_grupo	string. Group of the main diagnosis.
diag_princ_categoria	string. Category of the main diagnosis.
diag_princ_subcategoria	string. Subcategory of the main diagnosis.
idade_anos_min	numeric. Minimum age of patient, in years.
idade_anos_max	numeric. Maximum age of patient, in years.
proced_real	numeric. Numeric code of the realized hospital procedure.
lucene_query	string. A more complex lucene query can be presented here. The string must be informed using sigle quotes. If used, all other filters will be ignored.
agg	string. Aggregation level. 'mun' for municipalities, 'uf' for "unidades federativas" or 'regsaude' for "regiões de saúde".

Details

This function uses raw data from the Sistema de Informações de Internações Hospitalares (SIH) available at the PCDaS ElasticSearch cluster. A documentation about this data can be found at https://bigdata-metadados.icict.fiocruz.br/dataset/sistema-de-informacoes-de-mortalidade-sim. The CID-10 codes and name for chapters, group, category and subcategories of basic cause of death can be inspected at the same address above.

Value

A data.frame containing number of hospital admission authorizations (sih) for the aggregation level.

Examples

sim <- get_sih(conn = conn, ano = 2010, agr = "mun", sexo = "Masculino")
sim <- get_sih(conn = conn, ano = 2010, agr = "mun", diag_princ = "J448")
sim <- get_sih(conn = conn, ano = 2010, agr = "mun", idade_anos_min = 0, idade_anos_max = 10)
sim <- get_sih(conn = conn, ano = 2010, agr = "mun", proced_real = 310010039)
sih <- get_sih(conn = conn, agr = "mun", lucene_query = 'ano_internacao: 2010 AND def_raca_cor: "Preta" or "Branca"')

bigdata-icict/pcdasindi documentation built on March 11, 2020, 5:15 p.m.