The NetSAM (Network Seriation and Modularization) package takes an edgelist representation of a weighted or unweighted network as an input, performs network seriation and modularization analysis, and generates as files that can be used as an input for the onedimensional network visualization tool NetGestalt (http://www.netgestalt.org) or other network analysis. The NetSAM package can also generate correlation network (e.g. coexpression network) based on the input matrix data, perform seriation and modularization analysis for the correlation network and calculate the associations between the sample features and modules or identify the associated GO terms for the modules.
Package details 


Author  Jing Wang <jing.wang@bcm.edu> 
Maintainer  Zhiao Shi <zhiao.shi@gmail.com> 
License  LGPL 
Version  2.0.5 
Package repository  View on GitHub 
Installation 
Install the latest version of this package by entering the following in R:

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