NetSAM-package: Network Seriation and Modularization
In bingzhang16/NetSAM: Network Seriation And Modularization
NetSAM-package R Documentation
Network Seriation and Modularization
Description
The NetSAM (Network Seriation and Modularization) package takes an edge-list representation of a weighted or unweighted network as an input, performs network seriation and modularization analysis, and generates as files that can be used as an input for the one-dimensional network visualization tool NetGestalt (http://www.netgestalt.org) or other network analysis. Meanwhile, the NetSAM package can also generate correlation network (e.g. co-expression network) based on the input matrix data and then perform seriation and modularization analysis for correlation network.
Details
Package: NetSAM
Type: Package
Version: 1.31.1
Date: 2021-05-15
License: LGPL
LazyLoad: yes
Author(s)
Jing Wang
Maintainer: Zhiao Shi <zhiao.shi@gmail.com>
References
NetGestalt: integrating multidimensional omics data over biological networks. Nature Methods 10, 597-598 (2013).
See Also
NetSAM
MatSAM
bingzhang16/NetSAM documentation built on April 3, 2024, 3:35 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| NetSAM-package | R Documentation |
Network Seriation and Modularization
Description
The NetSAM (Network Seriation and Modularization) package takes an edge-list representation of a weighted or unweighted network as an input, performs network seriation and modularization analysis, and generates as files that can be used as an input for the one-dimensional network visualization tool NetGestalt (http://www.netgestalt.org) or other network analysis. Meanwhile, the NetSAM package can also generate correlation network (e.g. co-expression network) based on the input matrix data and then perform seriation and modularization analysis for correlation network.
Details
| Package: | NetSAM |
| Type: | Package |
| Version: | 1.31.1 |
| Date: | 2021-05-15 |
| License: | LGPL |
| LazyLoad: | yes |
Author(s)
Jing Wang Maintainer: Zhiao Shi <zhiao.shi@gmail.com>
References
NetGestalt: integrating multidimensional omics data over biological networks. Nature Methods 10, 597-598 (2013).
See Also
NetSAM
MatSAM
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.