Files in biobakery/SparseDOSSA2
A Statistical Model for Describing and Simulating Microbial Community Profiles
.github/ISSUE_TEMPLATE/config.yml
.github/README.md
.github/pull_request_template.md
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/EM.R
R/M_helpers.R
R/SparseDOSSA2.R
R/SparseDOSSA2_fit.R
R/copulasso.R
R/data.R
R/fit.R
R/generate.R
R/helpers.R
R/integration_helpers.R
R/likelihood_expectation.R
R/sim_helpers.R
R/spike.R
R/sysdata.rda
data/Stool_subset.rda
man/SparseDOSSA2.Rd
man/Stool_subset.Rd
man/control_fit.Rd
man/control_integrate.Rd
man/fitCV_SparseDOSSA2.Rd
man/fit_SparseDOSSA2.Rd
tests/testthat.R
tests/testthat/test-likelihood.R
tests/testthat/test-spike_in.R
vignettes/SparseDOSSA2.Rmd
vignettes/SparseDOSSA2.html
