ppo_traits_flatten: Turn the traits element or the entire list returned by...

In biocodellc/rppo: Access the Global Plant Phenology Data Portal

Turn the traits element or the entire list returned by [pp_traits()] into a data.frame.

Description

Turn the traits element or the entire list returned by [pp_traits()] into a data.frame.

Usage

ppo_traits_flatten(x, flatten_all = FALSE)

Arguments

x	(object) A list or data.frame as returned from link(rppo)[ppo_traits]
flatten_all	(logical) Should the output list be melted in a data.frame. Default : FALSE

Value

A list for each event id containing a list with the following elements:

• 'metadata': A data frame containing metadata

• 'taxonomy': A data.frame containing the taxonomy

• 'traits': A melted data.frame containing the traits value

IF flatten_all is TRUE, the list is flatten to a data.frame

Examples

r1 <- ppo_data(genus = "Quercus", termID = 'obo:PPO_0002313', limit = 10, timeLimit = 4)
r1_traits <- ppo_traits(r1, sorted = FALSE, flatten_traits = FALSE)
r1_traits <- ppo_traits_flatten(r1_traits, flatten_all = TRUE)

biocodellc/rppo documentation built on July 8, 2023, 12:45 p.m.