Man pages for biodataganache/leapR
Layered enrichment analysis of pathways R
| check_id_names | check_id_names |
| cluster_enrichment | cluster_enrichment |
| combine_omics | combine_omics |
| compare_column_names | compare_column_names |
| correlation_enrichment | correlation_enrichment |
| enrichment_in_abundance | enrichment_in_abundance |
| enrichment_in_groups | enrichment_in_groups |
| enrichment_in_relationships | enrichment_in_relationships |
| get_pathway_information | get_pathway_information |
| kinasesubstrates | Kinase substrate lists |
| krbpaths | KEGG, Reactome, BioCarta Pathways |
| leapR | leapR |
| longlist | Long list of patient samples |
| mo_krbpaths | Multi-Omic KEGG, Reactome, BioCarta Pathways |
| ncipid | NCI Gene lists |
| protdata | Protein expression data |
| read_abundance_data | read_abundance_data |
| read_gene_sets | read_gene_sets |
| shortlist | A list of pathways and genes that comprise these pathways... |
| transdata | Transcriptomic data |
