get_pathway_information: get_pathway_information

In biodataganache/leapR: Layered enrichment analysis of pathways R

get_pathway_information

Description

get_pathway_information extracts information about a pathway from a GeneSet object

Usage

get_pathway_information(geneset, path, remove.tags = FALSE)

Arguments

geneset	is a GeneSet object for pathway annotation
path	is the name of the gene set pathway to be return
remove.tags	boolean indicating whether ot remove tags

Value

list of pathway information

Examples

     library(leapR)
     
     # load example gene set
     data("ncipid")
     
     tnfpathway = get_pathway_information(ncipid, "tnfpathway")

biodataganache/leapR documentation built on July 16, 2025, 11:10 p.m.