API for biodiversity-aq/OmicsMetaData
OmicsMetaData: an R-package for interoperable and re-usable biodiversity 'omics (meta)data
| Global functions | |
|---|---|
| .onAttach | Source code |
| DwC.event-class | Man page |
| DwC.occurrence-class | Man page |
| ENA_allowed_terms | Man page |
| ENA_checklistAccession | Man page |
| ENA_geoloc | Man page |
| ENA_instrument | Man page |
| ENA_select | Man page |
| ENA_strat | Man page |
| FileNames.to.Table | Man page Source code |
| MIxS.metadata-class | Man page |
| OmicsMetaData | Man page |
| OmicsMetaData.help | Man page Source code |
| TaxIDLib | Man page |
| TermsLib | Man page |
| TermsSyn | Man page |
| TermsSyn_DwC | Man page |
| check.valid.MIxS.metadata | Man page Source code |
| check.valid.metadata.DwC | Man page Source code |
| combine.data | Man page Source code |
| combine.data.frame | Man page Source code |
| commonTax.to.NCBI.TaxID | Man page Source code |
| coordinate.to.decimal | Man page Source code |
| dataQC.DwC | Man page Source code |
| dataQC.DwC_general | Man page Source code |
| dataQC.LatitudeLongitudeCheck | Man page Source code |
| dataQC.MIxS | Man page Source code |
| dataQC.TaxonListFromData | Man page Source code |
| dataQC.TermsCheck | Man page Source code |
| dataQC.completeTaxaNamesFromRegistery | Man page Source code |
| dataQC.dateCheck | Man page Source code |
| dataQC.eventStructure | Man page Source code |
| dataQC.findNames | Man page Source code |
| dataQC.generate.footprintWKT | Man page Source code |
| dataQC.guess.env_package.from.data | Man page Source code |
| dataQC.taxaNames | Man page Source code |
| download.sequences.INSDC | Man page Source code |
| eMoF.to.wideTable | Man page Source code |
| find.dataset | Man page Source code |
| get.BioProject.metadata.INSDC | Man page Source code |
| get.ENAName | Man page Source code |
| get.boundingBox | Man page Source code |
| get.insertSize | Man page Source code |
| get.sample.attributes.INSDC | Man page Source code |
| multi.warnings | Man page Source code |
| prep.metadata.ENA | Man page Source code |
| renameSequenceFiles | Man page Source code |
| show,DwC.event-method | Man page |
| show,DwC.occurrence-method | Man page |
| show,MIxS.metadata-method | Man page |
| sync.metadata.sequenceFiles | Man page Source code |
| term.definition | Man page Source code |
| wideTab.to.hierarchicalTab | Man page Source code |
| wideTable.to.eMoF | Man page Source code |
| write.MIxS | Man page Source code |
