biomystery/BSgenome.Mmusculus.UCSC.mm10.masked: Full masked genome sequences for Mus musculus (UCSC version mm10)
Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, Dec. 2011) and stored in Biostrings objects. The sequences are the same as in BSgenome.Mmusculus.UCSC.mm10, except that each of them has the 2 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask) and (3) the mask of repeats from Tandem Repeats Finder (TRF mask).
Getting started
Browse package contents
Package details |
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| Author | The Bioconductor Dev Team |
| Bioconductor views | AnnotationData BSgenome Genetics Mus_musculus |
| Maintainer | Bioconductor Package Maintainer <maintainer@bioconductor.org> |
| License | Artistic-2.0 |
| Version | 1.3.99 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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