vignettes/RDataXMan.R

In biostatUniBS/RDataXMan: Data Extraction Management

## ----include = FALSE----------------------------------------------------------
knitr::opts_chunk$set(eval = FALSE)

## -----------------------------------------------------------------------------
#  library(RDataXMan)
#  initWkdir(wkdir = "Working directory")
#  initResearchFolder(wkdir = "Working directory", research.folder = "requestnum001")

## -----------------------------------------------------------------------------
#  genInclusion(wkdir = "Working directory", research.folder = "requestnum001",
#               table_name, data.type, database,
#               key.var, key.desc, identifier.var,
#               count, overwrite,
#               username, password)
#  genVariable(wkdir = "Working directory", research.folder = "requestnum001",
#              table_name, data.type, database,
#              identifier.var, omit.var, overwrite,
#              username, password)

## -----------------------------------------------------------------------------
#  extract_data(wkdir = "Working directory", research.folder = "requestnum001",
#               inclusion.xls.file, dataLogic, variable.xls.file,
#               select.output, overwrite,
#               username, password)