fetchCytobankExperiment: Imports Cytobank Experiment via the Cytobank API

Description Usage Arguments Value

View source: R/fetchCytobankExperiment.R

Description

Imports Cytobank Experiment via the Cytobank API

Usage

1
fetchCytobankExperiment(cyto_session, exp_id)

Arguments

cyto_session

A cytobank session created by authenticate

exp_id

The experiment id of the experiment to be retrived

Value

A list of experiment information including

1. A tibble of FCS files contained in the experiment and their panels

2. A tibble of sample tags from the experiment

3. A table of scales exported directly from cytobank

4. A transformerList version of the scales for use in flowWorkspace

5. A list of compensation matricies

6. A gating + population heirarchy imported from Cytobank by CytoML

7. A list of panels contained in the experiment

8. The experiment ID (character vector)

9. The experiment name (character vector)


bjreisman/cytotidyr documentation built on Nov. 22, 2020, 9:30 p.m.