remap_mini: xcore example molecular signatures
In bkaczkowski/xcore: xcore expression regulators inference
remap_mini R Documentation
xcore example molecular signatures
Description
Molecular signatures data intended for use in xcore vignette and examples.
It is build ReMap2020 molecular signatures constructed against FANTOM5
annotation, which can be found in xcoredata package.
Here the data is only a subset limited to core promoters
(promoters_f5_core) and randomly selected 600 signatures.
Usage
data(remap_mini)
Format
A dgCMatrix with 14191 rows and 600 columns holding
interaction matrix for subset of ReMap2020 molecular signatures against
FANTOM5 annotation. Rows corresponds to FANTOM5 promoters and columns to
signatures.
bkaczkowski/xcore documentation built on Jan. 26, 2024, 6:24 p.m.
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| remap_mini | R Documentation |
xcore example molecular signatures
Description
Molecular signatures data intended for use in xcore vignette and examples.
It is build ReMap2020 molecular signatures constructed against FANTOM5
annotation, which can be found in xcoredata package.
Here the data is only a subset limited to core promoters
(promoters_f5_core) and randomly selected 600 signatures.
Usage
data(remap_mini)
Format
A dgCMatrix with 14191 rows and 600 columns holding
interaction matrix for subset of ReMap2020 molecular signatures against
FANTOM5 annotation. Rows corresponds to FANTOM5 promoters and columns to
signatures.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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