Files in bkaczkowski/xcore
xcore expression regulators inference
.Rbuildignore
.github/workflows/biocrelease.yaml
.github/workflows/check.yaml
.github/workflows/pkgdown.yaml
.gitignore
.nojekyll
DESCRIPTION
NAMESPACE
NEWS.md
R/data.R
R/processing.R
R/stats.R
R/utils.R
README.md
_pkgdown.yml
data-raw/remap_mini.R
data-raw/rinderpest_mini.R
data/remap_mini.rda
data/rinderpest_mini.rda
inst/extdata/download.sh
inst/extdata/srx2study.csv
man/addSignatures.Rd
man/applyOverColumnGroups.Rd
man/applyOverDFList.Rd
man/design2factor.Rd
man/estimateStat.Rd
man/filterSignatures.Rd
man/fisherMethod.Rd
man/getCoverage.Rd
man/getInteractionMatrix.Rd
man/getVarianceWeightedAvgCoeff.Rd
man/isTRUEorFALSE.Rd
man/mae.Rd
man/maeSummary.Rd
man/modelGeneExpression.Rd
man/modelGeneExpression_ridge_regression_wraper.Rd
man/modelGeneExpression_significance_testing_wraper.Rd
man/mse.Rd
man/pipe.Rd
man/prepareCountsForRegression.Rd
man/regressionData.Rd
man/remap_mini.Rd
man/repVarianceWeightedAvgZscore.Rd
man/ridgePvals.Rd
man/rinderpest_mini.Rd
man/rsq.Rd
man/simplifyInteractionMatrix.Rd
man/stoufferZMethod.Rd
man/subsetWithMissing.Rd
man/translateCounts.Rd
tests/testthat.R
tests/testthat/test_processing.R
tests/testthat/test_stats.R
tests/testthat/test_utils.R
vignettes/flowchart.png
vignettes/web_only/gene_level_analysis.Rmd
vignettes/web_only/non_linear_model.Rmd
vignettes/xcore_vignette.Rmd
