getFDRThreshold: Find false discovery rate threshold
In bmansfeld/QTLseqR: QTL mapping using Bulk Segregant Analysis of Next Generation Sequencing data.
Description
Usage
Arguments
Value
Description
Given a vector of p-values and a set false discovery rate alpha the function
returns the lowest p-value in the vector for which the Benjamini-Hochberg
adjusted p-value (ie q-value) is less than that alpha.
Usage
1
getFDRThreshold(pvalues, alpha = 0.01)
Arguments
pvalues
a vector of p-values
alpha
the required false discovery rate alpha
Value
The p-value threshold that corresponds to the Benjamini-Hochberg adjusted p-value at the FDR set by alpha.
bmansfeld/QTLseqR documentation built on Jan. 25, 2020, 8:52 p.m.
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Description Usage Arguments Value
Description
Given a vector of p-values and a set false discovery rate alpha the function returns the lowest p-value in the vector for which the Benjamini-Hochberg adjusted p-value (ie q-value) is less than that alpha.
Usage
1 | getFDRThreshold(pvalues, alpha = 0.01)
|
Arguments
pvalues |
a vector of p-values |
alpha |
the required false discovery rate alpha |
Value
The p-value threshold that corresponds to the Benjamini-Hochberg adjusted p-value at the FDR set by alpha.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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