DensityMetrics: FUSION R command line interface - Computes point density...

View source: R/DensityMetrics.R

DensityMetricsR Documentation

FUSION R command line interface – Computes point density metrics using elevation-based slices.

Description

DensityMetrics creates command lines for the FUSION DensityMetrics program and optionally executes them.

Usage

DensityMetrics(
  groundfile = NULL,
  cellsize = NULL,
  slicethickness = NULL,
  outputfile = NULL,
  datafile = NULL,
  quiet = FALSE,
  verbose = FALSE,
  version = FALSE,
  newlog = FALSE,
  log = NULL,
  locale = FALSE,
  nolaszipdll = FALSE,
  skipfilecheck = FALSE,
  outlier = NULL,
  maxsliceht = NULL,
  ignoreoverlap = FALSE,
  nocsv = FALSE,
  class = NULL,
  first = FALSE,
  slices = NULL,
  grid = NULL,
  gridxy = NULL,
  align = NULL,
  buffer = NULL,
  cellbuffer = NULL,
  use64bit = TRUE,
  runCmd = TRUE,
  saveCmd = TRUE,
  cmdFile = NULL,
  cmdClear = FALSE,
  echoCmd = FALSE,
  comment = NULL
)

Arguments

groundfile

character (required): Name for ground surface model (PLANS DTM with .dtm extension). May be wildcard or text list file (extension .txt only).

cellsize

numeric (required): Desired grid cell size in the same units as LIDAR data.

slicethickness

numeric (required): Slice thickness for density metrics in the same units as LIDAR data.

outputfile

character (required): Base name for output file. Metrics are stored in CSV format with .csv extension unless the /nocsv switch is used. Other outputs are stored in files named using the base name and additional descriptive information. If the folder for the output file does not exist, it will be created when the function is called even when saving commands to a batch file.

datafile

character (required): Name(s) of lidar data files.

quiet

boolean: Suppress all output during the run.

verbose

boolean: Display all status information during the run.

version

boolean: Report version information and exit with no processing.

newlog

boolean: Erase the existing log file and start a new log

log

character: Use the name specified for the log file.

locale

boolean: Adjust program logic to input and output locale-specific numeric formats (e.g. use a comma for the decimal separator).

nolaszipdll

boolean: Suppress the use of the LASzip dll (c) Martin Isenburg... removes support for compressed LAS (LAZ) files. This option is only useful for programs that read or write point files.

skipfilecheck

boolean: Skip logic that checks for valid point files and removes those that are invalid prior to the start of point processing. This option is designed to overcome some limitations with windows and wildcard processing. This option is only useful for programs that read point data.

outlier

character: "low,high": Omit points with elevations below low and above high. When used with data that has been normalized using a ground surface, low and high are interpreted as heights above ground. You should use care when using /outlier:low,high with /minht and /maxht options. If the low value specified with /outlier is above the value specified with /minht, the value for /outlier will override the value specified for /minht. Similarly, if the high value specified with /outlier is less than the value specified for /maxht, the /outlier value will override the value for /maxht.

maxsliceht

numeric: "high": Limit the range of height slices from 0 to high.

ignoreoverlap

boolean: Ignore points with the overlap flag set (LAS V1.4+ format).

nocsv

boolean: Do not create an output file for cell metrics.

class

character: "#,#,#,...": LAS files only: Specifies that only points with classification values listed are to be included in the subsample. Classification values should be separated by a comma. e.g. (2,3,4,5) and can range from 0 to 31. If the first character in string is ~, the list is interpreted as the classes you DO NOT want included in the subsample. e.g. /class:~2,3 would include all class values EXCEPT 2 and 3.

first

boolean: Use only first returns to compute all metrics (default is to use all returns for metrics).

slices

character: "#,#,#,...": Use specific slice height breaks rather than evenly spaced breaks based on the range of heights in the data (max of 64 slice heights). The first slice always starts at 0.0.

grid

character: "X1,X2,Y1,Y2": Force the origin of the output grid to be (X,Y) instead of computing an origin from the data extents and force the grid to be W units wide and H units high...W and H will be rounded up to a multiple of cellsize.

gridxy

character: "X1,X2,Y1,Y2": Force the origin of the output grid to be (X1,Y1) instead of computing an origin from the data extents and force the grid to use (X2,Y2) as the upper right corner of the coverage area. The actual upper right corner will be adjusted to be a multiple of cellsize.

align

character: Force the origin and extent of the output grid to match the lower left corner and extent of the specified PLANS format DTM file.

buffer

numeric: Add a buffer to the data extent specified by /grid or /gridxy when computing metrics but only output data for the specified extent. The buffer width is first converted to a cellbuffer and then added all around the extent. The actual buffer width may be slightly larger than specified by width.

cellbuffer

numeric: Add a buffer to the data extent specified by /grid or /gridxy when computing metrics but only output data for the specified extent. The buffer (number of cells) is added around the extent.

use64bit

boolean: indicates 64-bit version of the program should be used.

runCmd

boolean: indicates command line should be executed.

saveCmd

boolean: indicates command line should be written to a file.

cmdFile

character: contains the name of the file to which commands should be written.

cmdClear

boolean: indicates file for commands should be deleted (cleared) before the command line is written.

echoCmd

boolean: indicates command line should be displayed.

comment

character string containing comment to be written to command file before writing the actual command. Only used when runCmd = FALSE and saveCmd = TRUE. When written, there is always a blank line before the comment line in the command file.

Value

Return value depends on runCmd. if runCmd = TRUE, return value is the (invisible) integer value return from the operating system after running the command. if runCmd = FALSE, return value is the (invisible) command line.

Multiple Commands

LTKFunctions generate a separate command for each item when the required parameters are lists. This is useful when you want to use the same command and options but different input data and output files. However, this works only when the switches and options are the same for all commands (not lists). If you try to use a list of switches and/or options and a list of input files, you will produce commands using all sets of switches and/or options for every input file.

See Also

Other LTKFunctions: CSV2Grid(), CanopyMaxima(), CanopyModel(), Catalog(), ClipDTM(), ClipData(), CloudMetrics(), Cover(), DTMDescribe(), FilterData(), FirstLastReturn(), GridMetrics(), GridSample(), GridSurfaceCreate(), GridSurfaceStats(), GroundFilter(), IntensityImage(), JoinDB(), MergeDTM(), MergeData(), MergeRaster(), RepairGridDTM(), ReturnDensity(), SplitDTM(), SurfaceSample(), SurfaceStats(), TINSurfaceCreate(), ThinData(), TopoMetrics(), TreeSeg(), fusionwrapr-package

Examples

## Not run: 
DensityMetrics("ground.dtm", 30.0, 4.0, "density.csv", "*.las")

## End(Not run)

bmcgaughey1/fusionwrapr documentation built on Dec. 1, 2024, 7:13 a.m.