Description Usage Value Examples
The configuration is a list of items.
cbc_quantiles
a named list of site-specific quantile functions for each CBC of interest
cbc_abnormals
a named list of site-specific functions that flag values as abnormal or not
cbc_vars
a list of names of CBC variables of interest, i.e. specific values of BASE_NAME
census_locations
a character vector locations that need to be used for modeling
c0
a value to use in training for c0
min_inventory
a value to use as offset to ensure a minimum threshold
history_window
how many days of history to use in training, default 200
penalty_factor
the penalty factor in training, default 15
start
the day when the model evaluation begins, default 10
initial_expiry_data
the number of units expiring a day after prediction begins and one day after that, i.e. a 2-vector
initial_collection_data
the number of units to collect on the prediction day, a day after, and another day after, i.e. a 3-vector
data_folder
full path of location of raw data files
report_folder
full path of where reports should go, must exist
output_folder
full path of where processed output data should go, must exist
log_folder
full path of where logs should go, must exist
model_update_frequency
how often to update the model, default 7 days
cbc_filename_prefix
a character expression describing the prefix of daily CBC file name, this is combined with the date is substituted with the date in YYYY-dd-mm format
census_filename_prefix
a character expression describing the prefix of daily census file name, this is combined with the date is substituted with the date in YYYY-dd-mm format
transfusion_filename_prefix
a character expression describing the prefix of daily transfusion file name, this is combined with the date is substituted with the date in YYYY-dd-mm format
output_filename_prefix
a character expression describing the prefix of daily output file name, this is combined with the date is substituted with the date in YYYY-dd-mm format
log_filename_prefix
a character expression describing the prefix of log file name, this is combined with the date is substituted with the date in YYYY-dd-mm format
inventory_filename_prefix
a character expression describing the prefix of the inventory file name, this is combined with the date is substituted with the date in YYYY-dd-mm format
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the value of package global sbc_config
.
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