API for bobverity/rmaverick
Analysis of population structure

Global functions
GTI_integrated_K_sim_cpp Source code
GTI_posterior_K_sim_cpp Source code
align_qmatrix Source code
assert_2d Source code
assert_bounded Source code
assert_cluster Source code
assert_dataframe Source code
assert_dim Source code
assert_eq Source code
assert_gr Source code
assert_greq Source code
assert_in Source code
assert_int Source code
assert_le Source code
assert_length Source code
assert_leq Source code
assert_list Source code
assert_logical Source code
assert_matrix Source code
assert_mavproject Source code
assert_ncol Source code
assert_noduplicates Source code
assert_non_null Source code
assert_nrow Source code
assert_null Source code
assert_numeric Source code
assert_pos Source code
assert_pos_int Source code
assert_same_length Source code
assert_same_length_multiple Source code
assert_single_int Source code
assert_single_logical Source code
assert_single_numeric Source code
assert_single_pos Source code
assert_single_pos_int Source code
assert_single_string Source code
assert_square_matrix Source code
assert_string Source code
assert_symmetric_matrix Source code
bind_data Man page Source code
call_hungarian Source code
call_hungarian_cpp Source code
default_colours Source code
define_default Source code
delete_set Man page Source code
force_vector Source code
get_GTI_logevidence_K Source code
get_GTI_posterior Source code
get_GTI_posterior_K Source code
get_GTI_posterior_model Source code
geweke_pvalue Source code
integrate_GTI_logevidence Source code
integrate_GTI_logevidence_K Source code
is.cluster Source code
is.maverick_GTI_logevidence Source code
is.maverick_GTI_logevidence_model Source code
is.maverick_GTI_path Source code
is.maverick_GTI_posterior Source code
is.maverick_GTI_posterior_model Source code
is.maverick_loglike_quantiles Source code
is.maverick_qmatrix_ind Source code
is.mavproject Man page Source code
log_sum Source code Source code
mat_to_rcpp Source code
maverick_file Man page Source code
mavproject Man page Source code
new_set Man page Source code
nice_format Source code
plot.maverick_GTI_logevidence Source code
plot.maverick_GTI_logevidence_model Source code
plot.maverick_GTI_path Source code
plot.maverick_GTI_posterior Source code
plot.maverick_GTI_posterior_model Source code
plot.maverick_loglike_quantiles Source code
plot.maverick_qmatrix_ind Source code
plot_GTI_path Man page Source code
plot_acf Man page Source code
plot_alpha Man page Source code
plot_density Man page Source code
plot_logevidence_K Man page Source code
plot_logevidence_model Man page Source code
plot_loglike Man page Source code
plot_loglike_quantiles Man page Source code
plot_posterior_K Man page Source code
plot_posterior_model Man page Source code
plot_qmatrix Man page Source code
plot_trace Man page Source code
print.maverick_GTI_logevidence Source code
print.maverick_GTI_logevidence_model Source code
print.maverick_GTI_path Source code
print.maverick_GTI_posterior Source code
print.maverick_GTI_posterior_model Source code
print.maverick_loglike_quantiles Source code
print.maverick_qmatrix_ind Source code
print.mavproject Man page Source code
print_full Man page Source code
process_data Source code
process_data_long Source code
process_data_wide Source code
quantile_95 Source code
rcpp_to_mat Source code
rdirichlet Source code
recalculate_evidence Man page Source code
rmaverick Man page
rmaverick-package Man page
run_mcmc Man page Source code
run_mcmc_cpp Source code
sim_data Man page Source code
summary.mavproject Man page Source code
test_convergence Source code
theme_empty Source code
update_progress Source code
user_yes_no Source code
bobverity/rmaverick documentation built on Aug. 24, 2018, 2:26 a.m.