get_gaps: Download the coordinates of centromeres. These are used for...

View source: R/vcf_utils.R

get_gapsR Documentation

Download the coordinates of centromeres. These are used for "splitting" admixture tracts that overlap a centromere and would therefore appear extensively long. http://rohsdb.usc.edu/GBshape/cgi-bin/hgTables?db=hg19&hgta_group=map&hgta_track=gap&hgta_table=gap&hgta_doSchema=describe+table+schema

Description

Download the coordinates of centromeres. These are used for "splitting" admixture tracts that overlap a centromere and would therefore appear extensively long. http://rohsdb.usc.edu/GBshape/cgi-bin/hgTables?db=hg19&hgta_group=map&hgta_track=gap&hgta_table=gap&hgta_doSchema=describe+table+schema

Usage

get_gaps()

bodkan/slimr documentation built on Feb. 3, 2024, 3:39 p.m.