mut_gt: Load mutation genotypes.

View source: R/vcf.R

mut_gtR Documentation

Load mutation genotypes.

Description

Load mutation genotypes.

Usage

mut_gt(vcf, mut_type = NULL, pop_origin = NULL, t_min = -Inf,
  t_max = Inf)

Arguments

vcf

VCF object.

mut_type

Mutation type as an integer.

pop_origin

Integer ID of a population of origin.

t_min

Lower bound on time of origin.

t_max

Upper bound on time of origin.

Value

GRanges object.


bodkan/slimr documentation built on Feb. 3, 2024, 3:39 p.m.