Man pages for bomeara/popularitree
Subsamples a tree to get popular taxa

generate_sampleGenerate a sample of species, weighted by their score
popularitreeGet a smaller tree with popular taxa spanning the diversity
species_get_commonReturn common name if known, otherwise return scientific name
species_gtrends_popularityGet a sum of hits of a species relative to a standard
species_ncbi_common_existsReturn 1 if a species has a common name in NCBI, 0 otherwise
tree_compute_measuresCompute popularity measures
tree_convert_to_commonConvert tips to common names if possible
bomeara/popularitree documentation built on Jan. 21, 2018, 12:53 a.m.