mark_calc: Estimate survivals/detection using likelihood method, with...

In boppingshoe/bootylator: Bootstrap Program for CSS Estimates

Description

Estimate survivals/detection using likelihood method, with logit link, and tally adult returns

Usage

mark_calc(ch, i, nocc, wt, phi_p_only, logit_link = "RMark", ...)

Arguments

ch	Input file made by format_dat() function.
i	Iteration number used by the bootstrap function bootystrapper().
nocc	Total detection events including the trawl.
wt	Indicates whether to weight the sampling probability (bootstrap only).
phi_p_only	Option to only calculate survivals and detection and not do the adult counts.
logit_link	Option to use package "RMark" or "marked" for estimating survival with logit link function. The default is package "RMark."

Value

Survivals, detection and returing adult counts

Examples

mark_calc(detect_data, i= 1, nocc= 6, wt= 'n', phi_p_only= 'y')

boppingshoe/bootylator documentation built on May 8, 2019, 1:01 p.m.