chisqmix | Chi-Squared Mixtures Distribution |
clustTrend | Cluster the genes dynamics into different dominant trends. |
data_simu_TcGSA | Simulated Data for TcGSA |
multtest.TcGSA | Computing the P-value of the Likelihood Ratios Applying a... |
plot1GS | Plotting a Specific Gene Set |
plotFit.GS | Plotting function for exploring the fitness of the mixed... |
plotMultipleGS | Plotting Multiple Gene Sets in a single plot |
plotPat.1GS | Plotting a Specific Gene Set Stratifying on Patients |
plotPat.TcGSA | Plot a Gene Set Trends Heatmap for each Patient. |
plotSelect.GS | Plotting (several) Selected Gene Set(s) in some Subjects |
plot.TcGSA | Plot a Gene Set Trends Heatmap. |
pval_simu | Computing P-values with a Simulated Sample from the Null... |
signifLRT.TcGSA | Identifying the Significant Gene Sets |
summary.TcGSA | Summarizing TcGSA |
TcGSA-internal | Internal TcGSA Functions |
TcGSA.LR | Computing the Likelihood Ratios for the Gene Sets under... |
TcGSA.LR.parallel | Parallel computing the Likelihood Ratios for the Gene Sets... |
TcGSA-package | Time-course Gene Set Analysis |
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