sfMM-simulPottsFast_cpp: Potts model simulation

Description Usage Arguments

Description

Simulation of isotropic Potts model with local interaction by Gibbs sampling. Slightly faster compared to simulPotts_cpp.

Usage

1
simulPottsFast_cpp(W_i, W_p, W_x, site_order, sample, rho, n, p, iter_nb)

Arguments

W_i

the 0-based row numbers for each non-zero element in the sparse neighbourhood matrix. integer vector.

W_p

the pointers to the initial (zero-based) index of elements in the colum of the sparse neighbourhood matrix. integer vector.

W_x

the non-zero elements of the matrix. numeric vector.

site_order

a specific order to go all over the sites. An integer vector or a negative number to indicate no specific order.

sample

A matrix containing the initial observations (by rows) for the various groups (by columns).

rho

A numeric corresponding to the Potts model parameter (i.e. intensity of the neighbourhood correlations).

n

The number of observations. integer.

p

The number of groups or colors. integer.

iter_nb

The maximum number of iteration of the Gibbs sampler. integer.


bozenne/MRIaggr documentation built on May 13, 2019, 1:39 a.m.