coef.rbindWald_lmm: Extract Coefficients From Combined Wald Tests Applied to...

View source: R/coef.R

coef.rbindWald_lmmR Documentation

Extract Coefficients From Combined Wald Tests Applied to Linear Mixed Models

Description

Combine estimated values across linear contrasts applied on parameters from different linear mixed models.

Usage

## S3 method for class 'rbindWald_lmm'
coef(
  object,
  effects = "Wald",
  method = "none",
  ordering = NULL,
  transform.names = TRUE,
  backtransform = NULL,
  simplify = TRUE,
  ...
)

Arguments

object

a rbindWald_lmm object.

effects

[character] should the linear contrasts involved in the Wald test be output ("Wald"), or the value of the linear mixed model parameters ("all")?

method

[character vector] should the estimated value for the linear contrasts be output (one of "none", "bonferroni", ..., "single-step2") and/or pooled linear contrast estimate(s) ("average", "pool.se", "pool.gls", "pool.gls1", "pool.rubin", "p.rejection")? Only relevant when effects = "Wald".

ordering

[character] should the output be ordered by name of the linear contrast ("contrast") or by model ("model").

transform.names

[logical] should the name of the coefficients be updated to reflect the transformation that has been used? Only relevant when effects="all".

backtransform

[logical] should the estimates be back-transformed?

simplify

[logical] should the output be a vector or a list with one element specific to each possible ordering (i.e. contrast or model). Only relevant when argument method refers to multiple comparisons and not to a pooling method.

...

Not used. For compatibility with the generic method.

Details

Argument effects: when evaluating the proportion of rejected hypotheses (effects="p.rejection") a "single-step" method will be used by default to evaluate the critical quantile. This can be changed by adding adjustment method, e.g. effects=c("bonferronin","p.rejection", in the argument.


bozenne/repeated documentation built on July 16, 2025, 11:16 p.m.