Man pages for brennanpincardiff/drawProteins
Package to Draw Protein Schematics from Uniprot API output

draw_canvasCreate ggplot2 object with protein chains from feature...
draw_chainsCreate ggplot2 object with protein chains from feature...
draw_domainsAdd protein domains to ggplot2 object.
draw_foldingAdd regions to ggplot object: alpha-helixes, beta-strands and...
draw_motifAdd protein motifs sites to ggplot2 object.
draw_phosphoAdd protein phosphorylation sites to ggplot2 object.
drawProteinsdrawProteins.
draw_recept_domAdd receptor domains to ggplot2 object.
draw_regionsAdd protein region sites to ggplot2 object.
draw_repeatAdd protein repeats sites to ggplot2 object.
extract_feat_accCreate a dataframe of protein features from JSON object (List...
extract_namesExtract protein names into a list
extract_transcriptsCreate a new dataframe of protein features from dataframe...
feature_to_dataframeCreate a dataframe of protein features from JSON object
five_rel_dataDataframe features of 5 human NFkappaB proteins Uniprot on 1...
five_rel_listFeatures of five human Rel A proteins
get_featuresGET features of protein(s) from UniProt API
parse_gffReformat file or url in gff format to allow to draw
phospho_site_infoCreate a dataframe of protein features from JSON object
protein_jsonUniprot infor human Rel A protein in JSON format
rel_A_featuresFeatures of human Rel A protein
rel_jsonHuman Rel A protein features in JSON format
tnfs_dataDataframe features of 2 human TNF receptors from Uniprot on 3...
brennanpincardiff/drawProteins documentation built on March 8, 2024, 8:15 a.m.