goSTAG-package: goSTAG Package
In brianbennettphd/goSTAG: A tool to use GO Subtrees to Tag and Annotate Genes within a set
Description
Details
Author(s)
References
Examples
Description
A tool to use GO Subtrees to Tag and Annotate Genes within a set.
Details
Package: goSTAG
Type: Package
Author(s)
Brian D. Bennett
Pierre R. Bushel
References
Bennett BD and Bushel PR. goSTAG: Gene Ontology Subtrees to Tag and Annotate Genes within a set. Source Code Biol Med. 2017 Apr 13.
Examples
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data( goSTAG_example_gene_lists )
go_terms <- loadGOTerms()
enrichment_matrix <- performGOEnrichment( goSTAG_example_gene_lists, go_terms )
hclust_results <- performHierarchicalClustering( enrichment_matrix )
clusters <- groupClusters( hclust_results )
cluster_labels <- annotateClusters( clusters )
plotHeatmap( enrichment_matrix, hclust_results, clusters, cluster_labels )
brianbennettphd/goSTAG documentation built on Nov. 14, 2020, 7:21 a.m.
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Description Details Author(s) References Examples
Description
A tool to use GO Subtrees to Tag and Annotate Genes within a set.
Details
| Package: | goSTAG |
| Type: | Package |
Author(s)
Brian D. Bennett
Pierre R. Bushel
References
Bennett BD and Bushel PR. goSTAG: Gene Ontology Subtrees to Tag and Annotate Genes within a set. Source Code Biol Med. 2017 Apr 13.
Examples
1 2 3 4 5 6 7 | data( goSTAG_example_gene_lists )
go_terms <- loadGOTerms()
enrichment_matrix <- performGOEnrichment( goSTAG_example_gene_lists, go_terms )
hclust_results <- performHierarchicalClustering( enrichment_matrix )
clusters <- groupClusters( hclust_results )
cluster_labels <- annotateClusters( clusters )
plotHeatmap( enrichment_matrix, hclust_results, clusters, cluster_labels )
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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