API for brianconroy/preferential_surveillance
Analysis of Disease Surveillance Data under Preferential Sampling
| Global functions | |
|---|---|
| K | Man page Source code |
| U_beta_loc | Source code |
| Ualpha | Source code |
| Ubeta | Source code |
| Ubeta_bench | Source code |
| Uw | Source code |
| Uw_bench | Source code |
| Uw_logit_cov | Source code |
| add_floor | Source code |
| alphaHmcUpdate | Source code |
| assemble_data | Source code |
| betaHmcUpdate | Source code |
| betaLocHmcUpdate | Source code |
| bias | Source code |
| burnin_after | Man page Source code |
| burnin_logistic_gp_cov | Source code |
| burnin_poisson_gp | Source code |
| calc_log_odds | Source code |
| calc_log_odds_output | Source code |
| calc_log_odds_pr | Man page Source code |
| calc_log_odds_sp | Man page Source code |
| calc_log_odds_true | Source code |
| calc_log_odds_true_general | Source code |
| calc_posterior_lodds | Source code |
| calc_posterior_risk_ds | Source code |
| calc_ps_contribution | Source code |
| calc_risk | Source code |
| calc_significance | Source code |
| caseHmcUpdateBench | Source code |
| combine_w | Man page Source code |
| continue_logistic_gp_cov | Source code |
| continue_mcmc | Man page Source code |
| continue_poisson_gp | Source code |
| cropmask | Source code |
| dU_alpha | Source code |
| dU_beta | Source code |
| dU_beta_bench | Source code |
| dU_beta_loc | Source code |
| dU_w | Source code |
| dU_w_bench | Source code |
| dU_w_logit_cov | Source code |
| downscale_tps | Source code |
| equalize_scales | Source code |
| expit | Source code |
| form_distance_matrix | Source code |
| g_var | Source code |
| getSamples | Source code |
| get_estimate | Source code |
| get_gamma_prior | Source code |
| get_igamma_prior | Source code |
| get_output | Source code |
| get_output_general | Source code |
| get_pad | Source code |
| get_true_val | Source code |
| ig_var | Source code |
| initialize_tuning | Source code |
| interpolate_w | Source code |
| interpolate_w_batched | Source code |
| krigeW | Source code |
| load_output | Man page Source code |
| load_prism_pcs | Source code |
| load_x_ca | Source code |
| load_x_ca2 | Source code |
| load_x_standard | Source code |
| logPost | Source code |
| logisticGp | Source code |
| logit | Source code |
| make_rmse_row | Source code |
| make_row | Source code |
| make_row_summary | Source code |
| make_row_wide | Source code |
| n_values | Source code |
| overlay | Man page |
| padded_plot | Source code |
| padded_plot2 | Source code |
| plot_traces | Man page Source code |
| plot_traces_general | Source code |
| poissonGp | Source code |
| postMean | Source code |
| postMedian | Source code |
| postSd | Source code |
| preferentialSampling | Man page Source code |
| rangeMhUpdate | Source code |
| reformat_saved_data | Source code |
| replace_vals | Source code |
| save_output | Man page Source code |
| simCounts | Source code |
| simDataset | Source code |
| simLocations | Man page Source code |
| summarize | Source code |
| summarize_mcmc_pscc | Source code |
| summarize_param | Man page |
| summarize_params | Source code |
| table_params | Man page Source code |
| table_params_summary | Source code |
| table_params_wide | Source code |
| update_tuning | Source code |
| viewHists | Source code |
| viewTraces | Source code |
| view_tr | Man page |
| view_tr_w | Man page Source code |
| wHmcUpdate | Source code |
| wHmcUpdateBench | Source code |
| wHmcUpdateLogitCov | Source code |
| write_latex_table | Source code |
