Files in brianconroy/preferential_surveillance
Analysis of Disease Surveillance Data under Preferential Sampling
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/K.R
R/alphaHmcUpdate.R
R/betaHmcUpdate.R
R/betaLocHmcUpdate.R
R/downscale.R
R/dualAveraging.R
R/logisticGp.R
R/poissonGp.R
R/preferentialSampling.R
R/rangeMhUpdate.R
R/riskMap.R
R/simData.R
R/simUtils.R
R/utils.R
R/wHmcUpdate.R
README.md
data-raw/prism_pca.R
data/prism_pca.rda
data/prism_pcas_ca.grd
data/prism_pcas_ca.gri
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.stn.csv
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_ppt_30yr_normal_4kmM2_annual_bil/PRISM_ppt_30yr_normal_4kmM2_annual_bil.xml
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.stn.csv
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_tdmean_30yr_normal_4kmM2_annual_bil/PRISM_tdmean_30yr_normal_4kmM2_annual_bil.xml
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.stn.csv
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_tmax_30yr_normal_4kmM2_annual_bil/PRISM_tmax_30yr_normal_4kmM2_annual_bil.xml
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_tmean_30yr_normal_4kmM2_annual_bil/PRISM_tmean_30yr_normal_4kmM2_annual_bil.xml
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.stn.csv
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_tmin_30yr_normal_4kmM2_annual_bil/PRISM_tmin_30yr_normal_4kmM2_annual_bil.xml
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.stn.csv
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil/PRISM_vpdmax_30yr_normal_4kmM2_annual_bil.xml
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.bil
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.bil.aux.xml
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.hdr
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.info.txt
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.prj
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.stn.csv
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.stx
data/prism_raw/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil/PRISM_vpdmin_30yr_normal_4kmM2_annual_bil.xml
data_analysis_fits.R
data_analysis_summary.R
man/K.Rd
man/burnin_after.Rd
man/calc_log_odds_pr.Rd
man/calc_log_odds_sp.Rd
man/combine_w.Rd
man/continue_mcmc.Rd
man/load_output.Rd
man/overlay.Rd
man/plot_traces.Rd
man/preferentialSampling.Rd
man/save_output.Rd
man/simLocations.Rd
man/summarize_param.Rd
man/table_params.Rd
man/view_tr.Rd
man/view_tr_w.Rd
preferential_surveillance.Rproj
simulation.R
simulation_analysis.R
simulation_data.R
