Description Usage Arguments Value
View source: R/output_posteriors.R
output_posteriors
makes posterior density plots for a fit MixSIAR model
1 2 3 4 5 6 7 8 9 10 11 12 | output_posteriors(
jags.1,
mix,
source,
output_options = list(summary_save = TRUE, summary_name = "summary_statistics",
sup_post = FALSE, plot_post_save_pdf = TRUE, plot_post_name = "posterior_density",
sup_pairs = FALSE, plot_pairs_save_pdf = TRUE, plot_pairs_name = "pairs_plot", sup_xy
= TRUE, plot_xy_save_pdf = FALSE, plot_xy_name = "xy_plot", gelman = TRUE, heidel =
FALSE, geweke = TRUE, diag_save = TRUE, diag_name = "diagnostics", indiv_effect =
FALSE, plot_post_save_png = FALSE, plot_pairs_save_png = FALSE, plot_xy_save_png =
FALSE, diag_save_ggmcmc = TRUE, return_obj = FALSE)
)
|
jags.1 |
rjags model object, output from |
mix |
output from |
source |
output from |
output_options |
list containing options for plots and saving:
|
list of ggplot objects (if return_obj = TRUE
)
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