Files in bristolmathmodellers/biddmodellingcourse
Practicals and Code for the BIDD Modelling Short Course
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DESCRIPTION
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R/SI_ode.R
R/plot_historic_prop_pul_tb.R
R/plot_historic_tb_ew.R
R/plot_model.R
R/pretty_figref.R
R/pretty_table.R
R/pretty_tabref.R
R/solve_ode.R
R/summarise_model.R
R/tb_interventions_timeline.R
R/tb_not_ew.R
R/utils-pipe.R
README.Rmd
README.md
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data-raw/tb_interventions_timeline.R
data-raw/tb_intervetions_timeline.csv
data-raw/tb_not_ew.R
data-raw/tb_not_ew.csv
data/tb_interventions_timeline.rda
data/tb_not_ew.rda
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docs/articles/practical-three.html
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docs/articles/resources/SEIR_flow_diag.png
docs/articles/resources/SHLIR_flow_diag.png
docs/articles/resources/SHLIR_real_flow_diag.png
docs/articles/solutions-one.html
docs/articles/solutions-three.html
docs/articles/solutions-three_files/figure-html/real-SHLIR-plot-1.png
docs/articles/solutions-three_files/figure-html/seir-plot-1.png
docs/articles/solutions-three_files/figure-html/shlir-plot-1.png
docs/articles/solutions-two.html
docs/articles/tb-fact-sheet.html
docs/articles/tb-fact-sheet_files/figure-html/plot-incidence-1.png
docs/articles/tb-fact-sheet_files/figure-html/plot-prop-pul-1.png
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docs/reference/SI_ode.html
docs/reference/index.html
docs/reference/pipe.html
docs/reference/plot_historic_prop_pul_tb-1.png
docs/reference/plot_historic_prop_pul_tb.html
docs/reference/plot_historic_tb_ew-1.png
docs/reference/plot_historic_tb_ew.html
docs/reference/plot_model-1.png
docs/reference/plot_model-2.png
docs/reference/plot_model-3.png
docs/reference/plot_model-4.png
docs/reference/plot_model.html
docs/reference/pretty_figref.html
docs/reference/pretty_table.html
docs/reference/pretty_tabref.html
docs/reference/solve_ode.html
docs/reference/summarise_model.html
docs/reference/tb_interventions_timeline.html
docs/reference/tb_not_ew.html
docs/sitemap.xml
man/SI_ode.Rd
man/pipe.Rd
man/plot_historic_prop_pul_tb.Rd
man/plot_historic_tb_ew.Rd
man/plot_model.Rd
man/pretty_figref.Rd
man/pretty_table.Rd
man/pretty_tabref.Rd
man/solve_ode.Rd
man/summarise_model.Rd
man/tb_interventions_timeline.Rd
man/tb_not_ew.Rd
tests/testthat.R
tests/testthat/test-SI_ode.R
tests/testthat/test-solve_ode.R
vignettes/.Rprofile
vignettes/.build.timestamp
vignettes/Makefile
vignettes/drafts/README.docx
vignettes/drafts/README.html
vignettes/drafts/fact-sheets/tb-fact-sheet/tb-fact-sheet.docx
vignettes/drafts/fact-sheets/tb-fact-sheet/tb-fact-sheet.html
vignettes/drafts/practicals/practical-one/practical-one.docx
vignettes/drafts/practicals/practical-one/practical-one.html
vignettes/drafts/practicals/practical-three/practical-three.docx
vignettes/drafts/practicals/practical-three/practical-three.html
vignettes/drafts/practicals/practical-two/practical-two.docx
vignettes/drafts/practicals/practical-two/practical-two.html
vignettes/drafts/readme/README.docx
vignettes/drafts/readme/README.html
vignettes/drafts/solutions/solutions-one/solutions-one.docx
vignettes/drafts/solutions/solutions-one/solutions-one.html
vignettes/drafts/solutions/solutions-three/solutions-three.docx
vignettes/drafts/solutions/solutions-three/solutions-three.html
vignettes/drafts/solutions/solutions-two/solutions-two.docx
vignettes/drafts/solutions/solutions-two/solutions-two.html
vignettes/practical-one.Rmd
vignettes/practical-three.Rmd
vignettes/practical-two.Rmd
vignettes/resources/SEIR_base_model.pptx
vignettes/resources/SEIR_flow_diag.png
vignettes/resources/SHLIR_base_model.pptx
vignettes/resources/SHLIR_flow_diag.png
vignettes/resources/SHLIR_real_flow_diag.png
vignettes/resources/SHLIR_real_model.pptx
vignettes/resources/bmj.csl
vignettes/resources/library.bib
vignettes/resources/menu-explore-id.png
vignettes/resources/mod-dyn-explore-id.png
vignettes/resources/model-code.png
vignettes/resources/param-explore-id.png
vignettes/resources/prev-model-compare.png
vignettes/resources/sel-model-explore-id.png
vignettes/solutions-one.Rmd
vignettes/solutions-three.Rmd
vignettes/solutions-two.Rmd
vignettes/tb-fact-sheet.Rmd
