nichenetr-package: nichenetr: Modeling Intercellular Communication by Linking...

In browaeysrobin/nichenetr: Modeling Intercellular Communication by Linking Ligands to Target Genes with NicheNet

nichenetr: Modeling Intercellular Communication by Linking Ligands to Target Genes with NicheNet

Description

This package allows you the investigate intercellular communication from a computational perspective. More specifically, it allows to investigate how interacting cells influence each other's gene expression. Functionalities of this package (e.g. including predicting extracellular upstream regulators and their affected target genes) build upon a probabilistic model of ligand-target links that was inferred by data-integration.

Author(s)

Maintainer: Chananchida Sang-aram [e-mail]

Authors:

• Robin Browaeys

See Also

Useful links:

• https://github.com/saeyslab/nichenetr

• Report bugs at https://github.com/saeyslab/nichenetr/issues

browaeysrobin/nichenetr documentation built on Sept. 9, 2024, 11:25 a.m.