MCrow: MCrow
In bryandmartin/MicrobiomePack: Tools for Microbiome data analysis
Description
This function simulates MC step for a single row. Should not need to be used by user directly.
Usage
1
Arguments
Yi
row of logratio matrix
Wi
corresponding row of count matrix
eYi
current expected value of logratio matrix
Q
number of OTUs minus the base, or length of Yi
base
OTU index used for base
sigInv
current estimate of sigma inverse
MCiter
number of MC samples to generate
stepsize
variance used for MH samples, defaults to 1. Tweak to adjust acceptance ratio
bryandmartin/MicrobiomePack documentation built on May 25, 2019, 3:25 p.m.
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Description
This function simulates MC step for a single row. Should not need to be used by user directly.
Usage
1 |
Arguments
Yi |
row of logratio matrix |
Wi |
corresponding row of count matrix |
eYi |
current expected value of logratio matrix |
Q |
number of OTUs minus the base, or length of Yi |
base |
OTU index used for base |
sigInv |
current estimate of sigma inverse |
MCiter |
number of MC samples to generate |
stepsize |
variance used for MH samples, defaults to 1. Tweak to adjust acceptance ratio |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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