calc_censor_likelihood: Calculates the interval censored likelihood when there is...

In bryanmayer/multdr: Simulating and fitting multiple exposure infectious disease dose-response models

Description

For interval censoring with left censor time Tl and right censor time Tr, this returns S(Tl) - S(Tr).

Usage

calc_censor_likelihood(exposure_series, exposure_times, censor_start,
  censor_end, hazard_risk, clr, loglik = T)

Arguments

exposure_series	The vector of repeated pathogen exposure values, should be pre-processed
exposure_times	The times of exposures
censor_start	Start of the censor period (exposure up to this time are survived)
censor_end	End of the censor period (infection occured in exposures between censor_start and censor_end)
hazard_risk	The per time risk of exposure during persistence
clr	The clearance rate of exposure
loglik	Whether to return log (default TRUE)

Value

Returns a survival likelihood for interval censored outcome (see calc_risk_mult for calculations)

bryanmayer/multdr documentation built on May 13, 2019, 8:11 a.m.