Man pages for brycerowland/thundeR
thundeR: R-package to run the Two-step Hi-c UNsupervised DEconvolution appRoach
| get_props | Get cell type proportions from THUNDER fit |
| mutate_basis_matrix | Compute summary statistics on rows of cell type profile... |
| nmf_fit | NMF fit for mixture matrix of Hi-C data |
| run_thunder | THUNDER estimates cell type proportions in bulk Hi-C datasets |
| subset_init_nmf | Subset Initial NMF fit after Feature Selection |
| thunder_estimate_CTP | Step Two of THUNDER algorithm |
| thunder_feature_selection | Step One of THUNDER algorithm. |
