View source: R/plot_Contsimmap.R
plot.contsimmap | R Documentation |
This function runs the default plotting method for continuous stochastic character maps (class "contsimmap
").
## S3 method for class 'contsimmap'
plot(
contsimmap,
traits = 1,
sims = sample(dim(contsimmap)[3], min(20, dim(contsimmap)[3])),
edges = NULL,
Col.by = c("simulation", "state", "edge", "time", dimnames(contsimmap)[[2]]),
Layer.by = NULL,
Alpha.by = NULL,
Mix.by = NULL,
Wgt.by = NULL,
Lty.by = NULL,
Lwd.by = NULL,
add = FALSE,
reverse.layers = FALSE,
...
)
contsimmap |
An object of class " |
traits |
A character/numeric vector specifying which traits within |
sims |
A character/numeric vector specifying which simulations within |
edges |
A character/numeric vector specifying which edges within |
Col.by, Layer.by, Alpha.by, Mix.by, Wgt.by, Lty.by, Lwd.by |
Any unambiguous abbreviation of "simulation", "state", "edge", "time", or trait
names within |
add |
|
... |
Just about any base R graphical argument you can think of–it should theoretically all work! Notably, entries of
There are also a few additional and potentially important arguments:
|
reverse.layering |
|
Nothing for now–just makes a plot!
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.