PlinkQC: R interface for running a Plink QC workflow.
In buddha2490/BERGgeneQC: Processing GenomeStudio output in the BERG
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This is an interface between R and PLINK so we don???t have to directly run PLINK code. It will run a bunch of QC statistics for samples and SNPs and generate a report of exclusions.
Usage
1
plinkQC(home)
Arguments
home
Home file path for the projects.
Value
An output RDS file will be created for each batch and saved to the ~/PLINK directory
Author(s)
Brian Carter
Examples
1
2
buddha2490/BERGgeneQC documentation built on Feb. 18, 2020, 9:35 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This is an interface between R and PLINK so we don???t have to directly run PLINK code. It will run a bunch of QC statistics for samples and SNPs and generate a report of exclusions.
Usage
1 | plinkQC(home)
|
Arguments
home |
Home file path for the projects. |
Value
An output RDS file will be created for each batch and saved to the ~/PLINK directory
Author(s)
Brian Carter
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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