QCPipeline: Runs the entire QC pipeline for all unprocessed batch reports
In buddha2490/BERGgeneQC: Processing GenomeStudio output in the BERG
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
This function runs all the other primary QC functions in the package (see below for the list). Afterwards, the user can generate a summary report using the finalReport() function.
Usage
1
QCPipeline(home)
Arguments
home
Home directory of the data, ex: "s:/diet validation genotyping"
Value
Nothing is returned
Author(s)
Brian Carter
See Also
makeOrg,
GSProcess,
movePlink,
PlinkQC,
BAFPlots,
finalReport
Examples
1
2
datasrc <- file.path("s:/diet validation study")
QCPipeline(datasrc)
buddha2490/BERGgeneQC documentation built on Feb. 18, 2020, 9:35 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) See Also Examples
Description
This function runs all the other primary QC functions in the package (see below for the list). Afterwards, the user can generate a summary report using the finalReport() function.
Usage
1 | QCPipeline(home)
|
Arguments
home |
Home directory of the data, ex: "s:/diet validation genotyping" |
Value
Nothing is returned
Author(s)
Brian Carter
See Also
makeOrg,
GSProcess,
movePlink,
PlinkQC,
BAFPlots,
finalReport
Examples
1 2 | datasrc <- file.path("s:/diet validation study")
QCPipeline(datasrc)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.