pickOne: Pick one GRange from many in a list
In buenrostrolab/easyLift: Convenience package for solving some liftover challenges

Description Usage Arguments Value Examples

Function to pick a single GRanges object per many in a given GRangeslist If none map, then a return a "chrZ" seqname is returned.

1	pickOne(grl, returnBooVec = FALSE)

`grl`	A GRangeslist object to be picked on
`returnBooVec`	If true, returns an S3 object where the first element is the flattened GRanges object and the second is a boolean vector indicating whether the region was successfully mapped or not.

A flattened GRanges object of the same length

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from <- paste0(system.file('extdata',package='easyLift'),'/exbed/hg19.quick.bed')
#easyLiftOver(sf, map = "hg19_hg38") # spits out the lifted over bed file
liftedGRanges <- easyLiftOver(from, map = "hg19_hg38", pickOne = TRUE)