drop.dupmarkers: Drop duplicate markers
In byandell/qtl: Tools for analyzing QTL experiments
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Drop markers with duplicate names; retaining the first of each set,
with consensus genotyps
Usage
1
drop.dupmarkers(cross, verbose=TRUE)
Arguments
cross
An object of class cross. See
read.cross for details.
verbose
If TRUE, print information on the numbers of genotypes
and markers omitted. If > 1, give more detailed information
on genotypes omitted.
Value
The input cross object, with any duplicate markers omitted
(except for one). The marker retained will have consensus genotypes;
if multiple versions of a marker have different genotypes for an
individual, they will be replaced by NA.
Any derived data (such as produced by calc.genoprob)
will be stripped off.
Author(s)
Karl W Broman, kbroman@biostat.wisc.edu
See Also
drop.nullmarkers, pull.markers, drop.markers,
summary.cross, clean.cross
Examples
1
2
3
byandell/qtl documentation built on May 13, 2019, 9:28 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Drop markers with duplicate names; retaining the first of each set, with consensus genotyps
Usage
1 | drop.dupmarkers(cross, verbose=TRUE)
|
Arguments
cross |
An object of class |
verbose |
If TRUE, print information on the numbers of genotypes and markers omitted. If > 1, give more detailed information on genotypes omitted. |
Value
The input cross object, with any duplicate markers omitted
(except for one). The marker retained will have consensus genotypes;
if multiple versions of a marker have different genotypes for an
individual, they will be replaced by NA.
Any derived data (such as produced by calc.genoprob)
will be stripped off.
Author(s)
Karl W Broman, kbroman@biostat.wisc.edu
See Also
drop.nullmarkers, pull.markers, drop.markers,
summary.cross, clean.cross
Examples
1 2 3 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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