inst/examples/rquipu.R

In c5sire/quipu: Summary Charts of Micro-Satellite Profiles for a Set of Biological Samples

library(quipu)

data(potato.quipu)
dat = potato.quipu

str(dat)

rquipu(dat)

rquipu(dat, layout="no text", res=c(600,400))


# This example produces high resolution output.
# It also shows more customization regarding colors and sizes of
# different elements.

if (interactive()) {
        rquipu(dat,
               layout="no text",
               img.format = "tiff",
               vertical.lines.width = 6,
               col.node = c("turquoise", "orange", "red", "purple"),
               lines.vertical.color = "wheat1",
               ranges.color = "wheat2", # allelic size range of set
               support.color = "wheat3",
               support.width = 8
        )     
}